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Genetic architecture and genomic predictive ability of apple quantitative traits across environments 认领 引用 被引量：8
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作者 Michaela Jung Beat Keller +15 位作者 Morgane Roth Maria José Aranzana Annemarie Auwerkerken Walter Guerra Mehdi Al-Rifaï Mariusz Lewandowski Nadia Sanin Marijn Rymenants Frédérique Didelot Christian Dujak Carolina Font i Forcada Andrea Knauf François Laurens Bruno Studer Hélène Muranty Andrea Patocchi 《Horticulture Research》 SCIE CSCD 2022年第1期1595-1616,共22页
Implementation of genomic tools is desirable to increase the efficiency of apple breeding.Recently,the multi-environment apple reference population(apple REFPOP)proved useful for rediscovering loci,estimating genomic ... Implementation of genomic tools is desirable to increase the efficiency of apple breeding.Recently,the multi-environment apple reference population(apple REFPOP)proved useful for rediscovering loci,estimating genomic predictive ability,and studying genotype by environment interactions(G×E).So far,only two phenological traits were investigated using the apple REFPOP,although the population may be valuable when dissecting genetic architecture and reporting predictive abilities for additional key traits in apple breeding.Here we show contrasting genetic architecture and genomic predictive abilities for 30 quantitative traits across up to six European locations using the apple REFPOP.A total of 59 stable and 277 location-specific associations were found using GWAS,69.2%of which are novel when compared with 41 reviewed publications.Average genomic predictive abilities of 0.18-0.88 were estimated using main-effect univariate,main-effect multivariate,multi-environment univariate,and multi-environment multivariate models.The G×E accounted for up to 24% of the phenotypic variability.This most comprehensive genomic study in apple in terms of traitenvironment combinations provided knowledge of trait biology and predictionmodels that can be readily applied for marker-assisted or genomic selection,thus facilitating increased breeding efficiency. 展开更多
关键词 studying genotype environment interactions g e rediscovering lociestimating genomic predictive abilityand reference population apple genomic predictive ability genomic tools genetic architecture reporting predictive abilities apple
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